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Title:
Microcosm drying-rewetting experiment calculated or post-experiment variables - SoilForEurope
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Free for members
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Published:
Gillespie, L. M., Fromin, N., Milcu, A., Buatois, B., Pontoizeau, C., & Hättenschwiler, S. (2020). Higher tree diversity increases soil microbial resistance to drought. Communications Biology, 3(1), 1-12.
Abstract:
A 2-cycle drying and rewetting experiment was conducted with the soil from the 2017 SoilForEUROPE campaign with the aim to see whether tree species mixing influenced drought effects on soil microbial functioning. Experiment details can be found in Gillespie et al. 2020 Communications Biology. This dataframe contains the calculated cumulative CO2 and N2O fluxes over the entire experiment and the post-experiment measurements (the measurements measured on the soil after the 2 drying-rewetting cycles). There are two other datasets associated with this experiment: SFE_Microbial_activity_Drought_data1 and SFE_Microbial_activity_Drought_data3
Design:
Experiment details can be found in Gillespie et al. 2020 Communications Biology
Spatial extent:
Finland, Romania, Poland, Italy
Temporal extent:
For each plot, 3-4 soil cores (2 cm diameter, 0-10 cm depth) were been taken for each of the five subplots after litter removal. See Gillespie et al. 2020 Communications Biology for detailed description of field sampling and experimental design.
Taxonomic extent:
Soil microorganisms
Measurement cirumstances:
No information available
Data analysis:
No information available

Filter:
Dataset column

Name:
Country
Definition:
Country
Unit:
No information available
Datagroup:
No information available
Keywords:
No information available
Values:
Sample values are not displayed because this column hasn't been approved yet.
Contributors:
No information available

Dataset column

Name:
Plot
Definition:
The plots in the sites
Unit:
No information available
Datagroup:
Exploratory country
Keywords:
No information available
Values:
Sample values are not displayed because this column hasn't been approved yet.
Contributors:
No information available

Dataset column

Name:
Treatment
Definition:
Control (kept at 80% of the carrying capacity during the experiment) or DRW (2 drying and rewetting cycles; dried to wilting point; drought duration and wilting point varied by country)
Unit:
No information available
Datagroup:
Experiment information
Keywords:
No information available
Values:
Sample values are not displayed because this column hasn't been approved yet.
Contributors:
No information available

Dataset column

Name:
Repetition
Definition:
3 repetitions per treatment and per control for each plot
Unit:
No information available
Datagroup:
Experiment information
Keywords:
No information available
Values:
Sample values are not displayed because this column hasn't been approved yet.
Contributors:
No information available

Dataset column

Name:
Field_ID
Definition:
Plot-treatment-repetition (eg. FIN07-c-1)
Unit:
No information available
Datagroup:
Experiment information
Keywords:
No information available
Values:
Sample values are not displayed because this column hasn't been approved yet.
Contributors:
No information available

Dataset column

Name:
Group
Definition:
The vials were divided by country and by drying speed (group 1 à 8)
Unit:
No information available
Datagroup:
Experiment information
Keywords:
No information available
Values:
Sample values are not displayed because this column hasn't been approved yet.
Contributors:
No information available

Dataset column

Name:
Chamber
Definition:
The Chamber where the samples spent the experiment (the vials from treatment 2 were moved from Chamber 6 to Chamber 0 due to a problem with Chamber 6, see tab 'Comments' for more details)
Unit:
No information available
Datagroup:
Experiment information
Keywords:
No information available
Values:
Sample values are not displayed because this column hasn't been approved yet.
Contributors:
No information available

Dataset column

Name:
Drought_duration
Definition:
Drought duration by country
Unit:
days
Datagroup:
Experiment information
Keywords:
No information available
Values:
Sample values are not displayed because this column hasn't been approved yet.
Contributors:
No information available

Dataset column

Name:
DOC
Definition:
Quantity of dissolved organic carbon by kg of soil
Unit:
mg C * kg-1 [dry soil]
Datagroup:
Soil information
Keywords:
No information available
Values:
Sample values are not displayed because this column hasn't been approved yet.
Contributors:
No information available

Dataset column

Name:
TDN
Definition:
Quantity of total dissolved nitrogen by kg of soil
Unit:
mg N * kg-1 [dry soil]
Datagroup:
Soil information
Keywords:
No information available
Values:
Sample values are not displayed because this column hasn't been approved yet.
Contributors:
No information available

Dataset column

Name:
Basal_respiration
Definition:
The flux in µg de C in the form of CO2 by hour by gram of soil (µg [C-CO2] * h^-1* g^-1 [dry soil]) without the addition of glucose; these results are from the dataframe 'Flux_Brute' Flux 4 (Rewetting 2)
Unit:
µg [C-CO2] * h^-1* g^-1 [dry soil]
Datagroup:
Gas flux
Keywords:
No information available
Values:
Sample values are not displayed because this column hasn't been approved yet.
Contributors:
No information available

Dataset column

Name:
SIR
Definition:
The flux in µg de C in the form of CO2 by hour by gram of soil (µg [C-CO2] * h^-1* g^-1 [dry soil]) with the addition of glucose
Unit:
µg [C-CO2] * h^-1* g^-1 [dry soil]
Datagroup:
Gas flux
Keywords:
No information available
Values:
Sample values are not displayed because this column hasn't been approved yet.
Contributors:
No information available

Dataset column

Name:
Biomass
Definition:
Microbial biomass unit calculated here following Anderson and Domsch 1978: SIR rate (µl C–CO2 g−1 dry soil h−1) × 40.04 + 0.37
Unit:
mg [microbial C] g^-1 [dry soil]
Datagroup:
Gas flux
Keywords:
No information available
Values:
Sample values are not displayed because this column hasn't been approved yet.
Contributors:
No information available

Dataset column

Name:
qCO2
Definition:
The metabolic quotient (respiration-to-biomass ratio) or qCO2 (respiration rate ratio : microbial biomass unit calculated here by the basal respiration / Biomass) and gives and idea of the microbial efficiency
Unit:
μg [C-CO2] mg [microbial C]^-1 h^-1
Datagroup:
Gas flux
Keywords:
No information available
Values:
Sample values are not displayed because this column hasn't been approved yet.
Contributors:
No information available

Dataset column

Name:
Cumulative_CO2
Definition:
Gillespie et al 2020 Comm Bio: we multiplied the CO2 and N2O flux rates, estimates of gas flux at a single point in time, by the duration of the experimental period preceding that mea- surement (Supplementary Fig. 3; the post-drought measurement by the drought period duration, and the post-rewetting measurement by the rewetting duration). The beginning flux measurement was multiplied by the buffer period (Supple- mentary Fig. 3, m0). Since we did not measure gas fluxes directly after the drying periods (when the soils dried from 80% WHC down to the drought intensity threshold before the start of the drought period), we averaged the gas flux mea- surement before the drying period and the measurement at the end of the drought period and then multiplied it by the drying period duration. We then summed these period cumulative flux estimates yielding an estimate of the total CO2 and N2O fluxes during the entire experiment.
Unit:
µg [C-CO2] * g^-1 [dry soil]
Datagroup:
Gas flux
Keywords:
No information available
Values:
Sample values are not displayed because this column hasn't been approved yet.
Contributors:
No information available

Dataset column

Name:
Cumulative_N2O
Definition:
Gillespie et al 2020 Comm Bio: we multiplied the CO2 and N2O flux rates, estimates of gas flux at a single point in time, by the duration of the experimental period preceding that mea- surement (Supplementary Fig. 3; the post-drought measurement by the drought period duration, and the post-rewetting measurement by the rewetting duration). The beginning flux measurement was multiplied by the buffer period (Supple- mentary Fig. 3, m0). Since we did not measure gas fluxes directly after the drying periods (when the soils dried from 80% WHC down to the drought intensity threshold before the start of the drought period), we averaged the gas flux mea- surement before the drying period and the measurement at the end of the drought period and then multiplied it by the drying period duration. We then summed these period cumulative flux estimates yielding an estimate of the total CO2 and N2O fluxes during the entire experiment.
Unit:
µg [N-N2O] * g^-1 [dry soil]
Datagroup:
Gas flux
Keywords:
No information available
Values:
Sample values are not displayed because this column hasn't been approved yet.
Contributors:
No information available

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Stephan
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